BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB017B01LP1|AL427109
(901 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1654 0.0
3x_Contig577 1106 0.0
>3x_Contig1805
Length = 19369
Score = 1654 bits (823), Expect = 0.0
Identities = 872/899 (96%), Gaps = 1/899 (0%)
Strand = Plus / Plus
Query: 3 gtatttagaaccaacagttcttacaasgattgaagatgctcgctaaaactttggctttgt 62
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 691 gtatttagaaccaacagttcttacaacaattgaagatgctcgctaaaactttggctttgt 750
Query: 63 tattcttagccgtgccaacttgcgttagggcccrbagtctmgaagttccgcaagtcgaac 122
||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 751 tattcttagccgtgccaacttgcgttagggcccaaagtctcgaagttccgcaagtcgaac 810
Query: 123 ctattaccactgaaaccactgtattctcgagaggaccgggacaaatcactacaacttatt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ctattaccactgaaaccactgtattctcgagaggaccgggacaaatcactacaacttatt 870
Query: 183 ccacggaagttgtgactgacgatggcactattccaactgttatgactatctactatgtcc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 ccacggaagttgtgactgacgatggcactattccaactgttatgactatctactatgtcc 930
Query: 243 agatcccgtattttgatgatgacgattatgttactgaggagaccatcgtgaccactgaat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 agatcccgtattttgatgatgacgattatgttactgaggagaccatcgtgaccactgaat 990
Query: 303 acacagcgtggacaggcacttatactactacgtattccactgaggttttgactctaagcg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 991 acacagcgtggacaggcacttatactactacgtattccactgaggttttgactctaagcg 1050
Query: 363 gtagccctataccgactgttaaaaccatttacaaggtgcagaccccagacacgtcagatg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 gtagccctataccgactgttaaaaccatttacaaggtgcagaccccagacacgtcagatg 1110
Query: 423 atggcggggatgatggcactgaaaccacgaccaccactgaaaccacagagtatactgtat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1111 atggcggggatgatggcactgaaaccacgaccaccactgaaaccacagagtatactgtat 1170
Query: 483 ggactggaacgtacaccaccacttattctaccgatgtgctaactgaaaccggtgatgatg 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 ggactggaacgtacaccaccacttattctaccgatgtgctaactgaaaccggtgatgatg 1230
Query: 543 gtatcgctaccgtcaagacgatttacaaggtgcagactccagacggcacagatgatgatg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 gtatcgctaccgtcaagacgatttacaaggtgcagactccagacggcacagatgatgatg 1290
Query: 603 gtggagctgaaactactacaacgactgaaagcaccgaatataccagatggactggtacat 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 gtggagctgaaactactacaacgactgaaagcaccgaatataccagatggactggtacat 1350
Query: 663 ataccactacttactccactgatatttcgactgaaamtggtgatgatggmatcgctactg 722
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 1351 ataccactacttactccactgatatttcgactgaaactggtgatgatggcatcgctactg 1410
Query: 723 ttaaractatctamttggttmagamcccagacggctmagatgatgacgatgatgaaacta 782
|||| |||||||| |||||| ||| ||||||||||| |||||||||||||||||||||||
Sbjct: 1411 ttaagactatctacttggttcagaccccagacggctcagatgatgacgatgatgaaacta 1470
Query: 783 ccgttammamtgaaactamamaataaactggmtggactggtgcttamactactacttatt 842
|||||| | |||||||| | |||| ||||| |||||||||||||| |||||||||||||
Sbjct: 1471 ccgttaccactgaaactacacaatacactggctggactggtgcttacactactacttatt 1530
Query: 843 ccactgacgtcttgamtgaaaaccggcgaagagtttaatccgactataaagactatcta 901
||||||||||||||| || ||||||||||||| | |||||||||| |||||||||||
Sbjct: 1531 ccactgacgtcttgactg-aaaccggcgaagacggttatccgactatcaagactatcta 1588
>3x_Contig577
Length = 1642
Score = 1106 bits (550), Expect = 0.0
Identities = 589/604 (97%)
Strand = Plus / Minus
Query: 3 gtatttagaaccaacagttcttacaasgattgaagatgctcgctaaaactttggctttgt 62
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1181 gtatttagaaccaacagttcttacaacaattgaagatgctcgctaaaactttggctttgt 1122
Query: 63 tattcttagccgtgccaacttgcgttagggcccrbagtctmgaagttccgcaagtcgaac 122
||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1121 tattctttgccgtgcaaacttgcgttagggcccaaagtctcgaagttccgcaagtcgaac 1062
Query: 123 ctattaccactgaaaccactgtattctcgagaggaccgggacaaatcactacaacttatt 182
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1061 ctattaccactgaaaccactgtattctcgagaggaccgggacagatcactacaacttatt 1002
Query: 183 ccacggaagttgtgactgacgatggcactattccaactgttatgactatctactatgtcc 242
|||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct: 1001 ccacggaagttgtgactgacgatggcaccattccaaccgttatgactatctactatgtcc 942
Query: 243 agatcccgtattttgatgatgacgattatgttactgaggagaccatcgtgaccactgaat 302
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 agatcccttattttgatgatgacgattatgttactgaggagaccatcgtgaccactgaat 882
Query: 303 acacagcgtggacaggcacttatactactacgtattccactgaggttttgactctaagcg 362
|||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 881 acacagtgtggacaggcacttatactactacatattccactgaggttttgactctaagcg 822
Query: 363 gtagccctataccgactgttaaaaccatttacaaggtgcagaccccagacacgtcagatg 422
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gtggccctataccgactgttaaaaccatttacaaggtgcagaccccagacacgtcagatg 762
Query: 423 atggcggggatgatggcactgaaaccacgaccaccactgaaaccacagagtatactgtat 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 atggcggggatgatggcactgaaaccacgaccaccactgaaaccacagagtatactgtat 702
Query: 483 ggactggaacgtacaccaccacttattctaccgatgtgctaactgaaaccggtgatgatg 542
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 701 ggactggaacgtacaccaccacttattctaccgatgtgctatctgaaaccggtgatgatg 642
Query: 543 gtatcgctaccgtcaagacgatttacaaggtgcagactccagacggcacagatgatgatg 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gtatcgctaccgtcaagacgatttacaaggtgcagactccagacggcacagatgatgatg 582
Query: 603 gtgg 606
||||
Sbjct: 581 gtgg 578
Score = 155 bits (77), Expect = 2e-37
Identities = 116/133 (87%), Gaps = 1/133 (0%)
Strand = Plus / Minus
Query: 769 cgatgatgaaactaccgttammamtgaaactamamaataaactggmtggactggtgctta 828
||||||||||||||||| || | |||||||| | |||| ||||| ||||||||||||||
Sbjct: 574 cgatgatgaaactaccgctaccactgaaactacacaatacactggctggactggtgctta 515
Query: 829 mactactacttattccactgacgtcttgamtgaaaaccggcgaagagtttaatccgacta 888
||||||||||||||||||||||||||| || ||||||||||||| | |||||||||
Sbjct: 514 cgctactacttattccactgacgtcttgactg-aaaccggcgaagacggttatccgacta 456
Query: 889 taaagactatcta 901
| |||||||||||
Sbjct: 455 tcaagactatcta 443
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4325
Number of Sequences: 1807
Number of extensions: 4325
Number of successful extensions: 198
Number of sequences better than 1.0e-20: 2
length of query: 901
length of database: 10,358,551
effective HSP length: 16
effective length of query: 885
effective length of database: 10,329,639
effective search space: 9141730515
effective search space used: 9141730515
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (101.0 bits)